-ELIXIR Toxicology Community Workshop-
Making toxicology tools more accessible and interoperable
Register here
SCIENTIFIC ORGANIZERS OF WORKSHOP 3
Egon Willighagen (NL) | Ola Spjuth (SE) |
Antreas Afantitis (CY) |
Andreas Tsoumanis (GR) |
Workshop 3 has the title "Making toxicology tools more accessible and interoperable". This workshop (for up to 40 participants) is a face-to-face, free-of-charge hands-on workshop, organised in the context of the first implementation study (INTOXICOM) of the ELIXIR Toxicology Community. See the ELIXIR Toxicology Community Whitepaper for more in-depth information about the community's goals.
Several projects, such as NanoSolveIT, ONTOX, and VHP4Safety, already make computational toxicology services available. In this workshop, we will cover various aspects of making computational tools available and how they are used.
The first session will focus on what tools currently exist and how they relate to ELIXIR Europe. This session will be user-centric and will give an overview of what is available and how ELIXIR solutions like FAIRsharing and bio.tools can be used to find tools and what information about the tools they provide.
The first day continues with a session bridging data with the tools. This session is user-centric with experimental toxicologists, explaining how their data can integrate with these computational tools. For example, how data hosted on Figshare can be used in tools, or how computational workflows can bridge data repositories with computational tools.
The second day continues with a session on how computational tools can address data gaps and enhance experimental toxicology data. Topics in this session are expected to explain how computational solutions help give biological and toxicological context, how AI is used for predictions, and how large language models may help with literature research.
TARGET AUDIENCE
Toxicologists who are interested in learning more about computational toxicology and how it can be used for and with their experimental data.
WHEN
Day 1: Wednesday 26.03. from 11h to 18h & subsequent social dinner
Day 2: Thursday 27.03. from 9h to 15h
WHERE
SciLifeLab, hosted by SciLifeLab Data Centre, Uppsala, Sweden
Address
BMC, Husargatan 3
751 22 Uppsala
INTRODUCTORY WEBINAR
In preparation for the workshop, the introductory webinar for this workshop will be held two weeks before the workshop and is in principle mandatory. During this one-hour meeting participants can introduce themselves. In a co-creation-style we will finalize the details of the programme based on the scheme below.
REGISTRATION
Questions? Please let me know: Meike Bünger.
Register here
Find suitable Hotels here.
Draft PROGRAMME
Wednesday, March 26
11.00 - 11.15 | Opening, introduction to ELIXIR and the ELIXIR Toxicology Community [Egon Wilighagen] and ScilifeLab [Ola Spjuth] |
11.15 - 11.30 | Tour de table |
11.30 - 11.40 | Implementation study and workshop overview [Egon Willighagen] |
11.40 - 13.30 |
Topic 1: What tools for toxicology exist? Existing tools relevant for toxicology (analysis, FAIR etc) [Egon Willighagen] |
13.30 - 17.00 |
Topic 2: User stories on data and tools - challenges and opportunities in toxicology Case study talks by invited speakers followed by discussions on what is missing
More speakers to be announced |
17.00 - 17.30 | Summary of the day [Ola Spjuth] |
18.00 - | Workshop social dinner [Location t.b.a.] |
Thursday March 27
9.00 - 9.45 |
Introduction to workshop day 2 |
9.45 - 12.00 |
Topic 3: Tools and opportunities to enrich toxicological data
|
12.00 - 13.00 | Lunch |
13.30 - 14.45 |
Discussions: what is missing, key challenges, what next? |
14.45 - 15.00 | Wrap up |
Find here more information about the ELIXIR Toxicology Community.
INTOXICOM-WS-2
Registration website for INTOXICOM-WS-2Meike Bünger, Health-RImeike.bunger@health-ri.nl
Meike Bünger, Health-RImeike.bunger@health-ri.nlhttps://www.aanmelder.nl/intoxicom-ws-2
2024-11-27
2024-11-28
OfflineEventAttendanceMode
EventScheduled
INTOXICOM-WS-2INTOXICOM-WS-20.00EUROnlineOnly2019-01-01T00:00:00Z
To be announcedTo be announced